BioMolecular Structure Course 97

Sites:

General

Modeling

PDB > Search

ExPASy

ProtSci

NCBI

Blast

EMBL

Biotech Validation Suite

Software:

Rasmol/CHIME > Commands

Swiss-PDB Viewer

Namot

Overview

The overall theme of the course is understanding macromolecular structures in biology. Traditional lectures will present concepts in structure, including the physical basis for structure and stability, molecular interactions, and design. See the course syllabus for more detail.

See also seminars of interest to the class!

Instructors:

Lynmarie Thompson 1323J LGRT X5-0827 Thompson@Chem.UMass.edu

Craig Martin 1436 LGRT X5-3299 CMartin@Chem.UMass.edu

News:

Aspartate Receptor Presentation - L Thompson
Check out Atlas of Nucleic Acid Structures
Nucleic Acid Views - Under construction!
- Hammerhead Ribozyme and an (intermediate)
- Group I Ribozyme
- A, B, Z DNA Comparison
- B Form
- A Form -> compared with B
- Z Form -> compared with B
- PNA -> compared with B
A new CHIME authoring shell is available in the CRC
CHIME Authoring Demo - Engrailed Homeodomain protein (see also a static picture) - Download the files.
A new (2nd) edition of the nucleic acids text is at the Annex